module wrap_nf 1,3 use shr_kind_mod, only: r8 => shr_kind_r8, r4 => shr_kind_r4 use abortutils, only: endrun use cam_logfile, only: iulog #include <netcdf.inc> !------------------------------------------------------------------------------- ! ! Purpose: ! ! Wrapper routines for the netCDF library for input and output data. ! ! Author: Jim Rosinski ! ! $Id$ ! !------------------------------------------------------------------------------- contains !=============================================================================== !=============================================================================== subroutine wrap_redef (nfid),1 implicit none integer, intent(in):: nfid integer ret ! NetCDF return code ret = nf_redef (nfid) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_redef !=============================================================================== subroutine wrap_enddef (nfid),1 implicit none integer, intent(in):: nfid integer ret ! NetCDF return code ret = nf_enddef (nfid) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_enddef subroutine wrap_create (path, cmode, ncid),1 implicit none !------------------------------------------------------------------------------- ! ! Purpose: ! ! Create a netCDF file for reading and/or writing ! !------------------------------------------------------------------------------- character*(*), intent(in):: path integer, intent(in):: cmode integer, intent(out):: ncid integer ret ! NetCDF return code ret = nf_create (path, cmode, ncid) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_create !=============================================================================== subroutine wrap_inq_unlimdim (nfid, dimid),1 implicit none !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets dimension name for a given dimension id ! !------------------------------------------------------------------------------- integer, intent(in):: nfid integer, intent(in):: dimid integer ret ! NetCDF return code ret = nf_inq_unlimdim (nfid, dimid) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_inq_unlimdim subroutine wrap_inq_dim (nfid, dimid, dimname, dimlen),1 implicit none !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets dimension name for a given dimension id ! !------------------------------------------------------------------------------- integer, intent(in):: nfid integer, intent(in):: dimid integer, intent(out):: dimlen character*(*), intent(out):: dimname integer ret ! NetCDF return code ret = nf_inq_dim (nfid, dimid, dimname, dimlen) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_inq_dim subroutine wrap_inq_nvars (nfid, nvars),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets number of variables in file ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(out):: nvars integer ret ! NetCDF return code ret = nf_inq_nvars (nfid, nvars) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_inq_nvars subroutine wrap_inq_ndims (nfid, ndims),1 implicit none !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets number of dimensions in file ! !------------------------------------------------------------------------------- integer, intent(in):: nfid integer, intent(out):: ndims integer ret ! NetCDF return code ret = nf_inq_ndims (nfid, ndims) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_inq_ndims !=============================================================================== subroutine wrap_inq_dimid (nfid, dimname, dimid) 2,1 implicit none !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets the dimension id ! !------------------------------------------------------------------------------- integer, intent(in):: nfid integer, intent(out):: dimid character*(*), intent(in):: dimname integer ret ! NetCDF return code ret = nf_inq_dimid (nfid, dimname, dimid) if(ret==NF_NOERR) return if (ret/=NF_EBADDIM) call handle_error (ret) dimid=-1 ! do not exist on bad dim. This allows the user to check for dims that may not ! be in the file end subroutine wrap_inq_dimid !=============================================================================== subroutine wrap_inq_dimlen (nfid, dimid, dimlen) 2,1 implicit none !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets the dimension length for a given dimension ! !------------------------------------------------------------------------------- integer, intent(in):: nfid integer, intent(in):: dimid integer, intent(out):: dimlen integer ret ! NetCDF return code ret = nf_inq_dimlen (nfid, dimid, dimlen) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_inq_dimlen !=============================================================================== subroutine wrap_inq_vardimid (nfid, varid, dimids),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Returns the dimension Id's from a variable ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(out):: dimids(*) integer ret ! NetCDF return code ret = nf_inq_vardimid (nfid, varid, dimids) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_inq_vardimid !=============================================================================== subroutine wrap_inq_varndims (nfid, varid, ndims),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Returns the dimension Id's from a variable ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(out):: ndims integer ret ! NetCDF return code ret = nf_inq_varndims (nfid, varid, ndims) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_inq_varndims !=============================================================================== subroutine wrap_inq_varid (nfid, varname, varid, abort) 2,1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Returns the variable ID ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(out):: varid character*(*), intent(in):: varname logical, optional :: abort integer ret ! NetCDF return code logical :: call_endrun ret = nf_inq_varid (nfid, varname, varid) if (ret/=NF_NOERR ) then call_endrun = .true. if ( present(abort) ) then call_endrun = abort endif if ( call_endrun ) then write(iulog,*)'wrap_inq_varid: id for ',trim(varname),' not found' call handle_error (ret) else varid = -1 endif end if end subroutine wrap_inq_varid !=============================================================================== subroutine wrap_inq_var (nfid, varid, varname, xtype, ndims, &,1 dimids, natts) !------------------------------------------------------------------------------- ! ! Purpose: ! ! Returns the variable name, type, number of dimensions, dimension ID's, and number of attributes ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(out):: xtype integer, intent(out):: ndims integer, intent(out):: dimids(*) integer, intent(out):: natts character*(*), intent(out):: varname integer ret ! NetCDF return code ret = nf_inq_var (nfid, varid, varname, xtype, ndims, dimids, & natts) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_inq_var !=============================================================================== subroutine wrap_inq_varname (nfid, varid, varname),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Returns the variable name from the dimension ID ! !------------------------------------------------------------------------------- implicit none integer ret ! NetCDF return code integer, intent(in):: nfid integer, intent(in):: varid character*(*), intent(out):: varname ret = nf_inq_varname (nfid, varid, varname) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_inq_varname !=============================================================================== subroutine wrap_get_att_text (nfid, varid, attname, atttext),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Returns the attribute text from the given variable ID and attribute name ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid character*(*), intent(in):: attname character*(*), intent(out):: atttext integer ret ! NetCDF return code ret = nf_get_att_text (nfid, varid, attname, atttext) if (ret/=NF_NOERR) then write(iulog,*)'WRAP_GET_ATT_TEXT: error reading attribute '//trim(attname) call handle_error (ret) endif end subroutine wrap_get_att_text !=============================================================================== subroutine wrap_put_att_text (nfid, varid, attname, atttext),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Puts the given attribute text to variable ID. ! ! This routine violates the convetion that the wrapper codes take an identical ! set of arguments as the netcdf library code. The length of the character ! argument is computed inside the wrapper. ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid character*(*), intent(in):: attname character*(*), intent(in):: atttext integer ret ! NetCDF return code integer siz siz = len_trim(atttext) ret = nf_put_att_text (nfid, varid, attname, siz, atttext) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_put_att_text !=============================================================================== subroutine wrap_put_att_realx (nfid, varid, attname, xtype, len, &,1 attval) !------------------------------------------------------------------------------- ! ! Purpose: ! ! Puts the given real attribute to the variable id ! !------------------------------------------------------------------------------- implicit none integer , intent(in):: nfid integer , intent(in):: varid integer , intent(in):: xtype integer , intent(in):: len character*(*) , intent(in):: attname real(r8) , intent(in):: attval(len) integer ret ! NetCDF return code ret = nf_put_att_double (nfid, varid, attname, xtype, len, attval) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_put_att_realx !=============================================================================== subroutine wrap_def_dim (nfid, dimname, len, dimid),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Defines the input dimension ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: len integer, intent(out):: dimid character*(*), intent(in):: dimname integer ret ! NetCDF return code ret = nf_def_dim (nfid, dimname, len, dimid) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_def_dim !=============================================================================== subroutine wrap_def_var (nfid, name, xtype, nvdims, vdims, varid),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Defines the given variable ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in)::xtype integer, intent(in)::nvdims integer, intent(out)::varid integer, intent(in):: vdims(nvdims+1) character*(*), intent(in):: name integer ret ! NetCDF return code ret = nf_def_var (nfid, name, xtype, nvdims, vdims, varid) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_def_var !=============================================================================== subroutine wrap_get_var_realx (nfid, varid, arr),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets the given real variable from a input file ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid real(r8), intent(out):: arr(*) integer ret ! NetCDF return code ret = nf_get_var_double (nfid, varid, arr) if (ret/=NF_NOERR) then write(iulog,*)'WRAP_GET_VAR_REALX: error reading varid =', varid call handle_error (ret) end if end subroutine wrap_get_var_realx !=============================================================================== subroutine wrap_get_var_real4 (nfid, varid, arr),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets the given real variable from a input file ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid real(r4), intent(out):: arr(*) integer ret ! NetCDF return code ret = nf_get_var_real (nfid, varid, arr) if (ret/=NF_NOERR) then write(iulog,*)'WRAP_GET_VAR_REAL4: error reading varid =', varid call handle_error (ret) end if end subroutine wrap_get_var_real4 !=============================================================================== subroutine wrap_get_scalar_realx (nfid, varid, x),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets the given real variable from a input file ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid real(r8), intent(out):: x integer ret ! NetCDF return code ret = nf_get_var_double (nfid, varid, x) if (ret/=NF_NOERR) then write(iulog,*)'WRAP_GET_SCALAR_REALX: error reading varid =', varid call handle_error (ret) end if end subroutine wrap_get_scalar_realx !=============================================================================== subroutine wrap_get_var_int (nfid, varid, arr),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets the given integer variable from a input file ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(out):: arr(*) integer ret ! NetCDF return code ret = nf_get_var_int (nfid, varid, arr) if (ret/=NF_NOERR) then write(iulog,*)'WRAP_GET_VAR_INT: error reading varid =', varid call handle_error (ret) end if end subroutine wrap_get_var_int !=============================================================================== subroutine wrap_get_scalar_int (nfid, varid, x),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets the given integer variable from a input file ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(out):: x integer ret ! NetCDF return code ret = nf_get_var_int (nfid, varid, x) if (ret/=NF_NOERR) then write(iulog,*)'WRAP_GET_SCALAR_INT: error reading varid =', varid call handle_error (ret) end if end subroutine wrap_get_scalar_int !=============================================================================== subroutine wrap_get_vara_realx (nfid, varid, start, count, arr),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets a range of the given real variable from a input file ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in)::varid integer, intent(in)::start(*) integer, intent(in)::count(*) real(r8), intent(out):: arr(*) integer ret ! NetCDF return code ret = nf_get_vara_double (nfid, varid, start, count, arr) if (ret/=NF_NOERR) then write(iulog,*)'WRAP_GET_VARA_REALX: error reading varid =', varid call handle_error (ret) end if end subroutine wrap_get_vara_realx !=============================================================================== subroutine wrap_get_vara_int (nfid, varid, start, count, arr),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets a range of the given integer variable from a input file. ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(in):: start(*) integer, intent(in):: count(*) integer, intent(out):: arr(*) integer ret ! NetCDF return code ret = nf_get_vara_int (nfid, varid, start, count, arr) if (ret/=NF_NOERR) then write(iulog,*)'WRAP_GET_VARA_INT: error reading varid =', varid call handle_error (ret) end if end subroutine wrap_get_vara_int !=============================================================================== subroutine wrap_get_vara_text (nfid, varid, start, count, text),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Gets a range of the given text variable to input file. ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(in):: start(*) integer, intent(in):: count(*) character*(*), intent(out):: text(*) integer ret ! NetCDF return code ret = nf_get_vara_text (nfid, varid, start, count, text) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_get_vara_text !=============================================================================== subroutine wrap_open (path, omode, ncid) 1,1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Open a netCDF file ! !------------------------------------------------------------------------------- implicit none character*(*), intent(in):: path integer, intent(in):: omode integer, intent(out):: ncid integer ret ! NetCDF return code ret = nf_open (path, omode, ncid) if (ret/=NF_NOERR) then write(iulog,*)'WRAP_OPEN: nf_open failed for file ',path call handle_error (ret) end if end subroutine wrap_open !=============================================================================== subroutine wrap_close (ncid),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Close netCDF file ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: ncid integer ret ! NetCDF return code ret = nf_close (ncid) if (ret/=NF_NOERR) then write(iulog,*)'WRAP_CLOSE: nf_close failed for id ',ncid call handle_error (ret) end if end subroutine wrap_close !=============================================================================== subroutine wrap_put_var_int (nfid, varid, arr),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Put a integer variable on output file. ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(in):: arr(*) integer ret ! NetCDF return code ret = nf_put_var_int (nfid, varid, arr) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_put_var_int !=============================================================================== subroutine wrap_put_var1_int (nfid, varid, index, ival),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Put a variable on output file at a given index. ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(in):: index(*) integer, intent(in):: ival integer ret ! NetCDF return code ret = nf_put_var1_int (nfid, varid, index, ival) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_put_var1_int !=============================================================================== subroutine wrap_put_vara_int (nfid, varid, start, count, arr),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Put a range of a integer variable on a output file. ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(in):: start(*) integer, intent(in):: count(*) integer, intent(in):: arr(*) integer ret ! NetCDF return code ret = nf_put_vara_int (nfid, varid, start, count, arr) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_put_vara_int !=============================================================================== subroutine wrap_put_vara_text (nfid, varid, start, count, text),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Put a range of the given text variable to output file. ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(in):: start(*) integer, intent(in):: count(*) character*(*), intent(in):: text(*) integer ret ! NetCDF return code ret = nf_put_vara_text (nfid, varid, start, count, text) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_put_vara_text !=============================================================================== subroutine wrap_put_var1_realx (nfid, varid, index, val),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Put the given real variable to output file at given index. ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(in):: index(*) real(r8), intent(in):: val integer ret ! NetCDF return code ret = nf_put_var1_double (nfid, varid, index, val) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_put_var1_realx !=============================================================================== subroutine wrap_put_vara_realx (nfid, varid, start, count, arr),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Output the given portion of the real array. ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(in):: start(*) integer, intent(in):: count(*) real(r8), intent(in):: arr(*) integer ret ! NetCDF return code ret = nf_put_vara_double (nfid, varid, start, count, arr) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_put_vara_realx !=============================================================================== subroutine wrap_put_vara_real (nfid, varid, start, count, arr),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Output the given portion of the real array. ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid integer, intent(in):: start(*) integer, intent(in):: count(*) real(r4), intent(in):: arr(*) integer ret ! NetCDF return code ret = nf_put_vara_real (nfid, varid, start, count, arr) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_put_vara_real !=============================================================================== subroutine wrap_put_var_realx (nfid, varid, arr),1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Put the given real variable to output file. ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: nfid integer, intent(in):: varid real(r8), intent(in):: arr(*) integer ret ! NetCDF return code ret = nf_put_var_double (nfid, varid, arr) if (ret/=NF_NOERR) call handle_error (ret) end subroutine wrap_put_var_realx !=============================================================================== subroutine handle_error(ret) 37,1 !------------------------------------------------------------------------------- ! ! Purpose: ! ! Handle netCDF errors. ! !------------------------------------------------------------------------------- implicit none integer, intent(in):: ret write(iulog,*)nf_strerror(ret) call endrun ('HANDLE_ERROR') end subroutine handle_error !=============================================================================== end module wrap_nf